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dc.contributor.authorPawlowski, Jan
dc.contributor.authorKelly-Quinn, Mary
dc.contributor.authorAltermatt, Florian
dc.contributor.authorApothéloz-Perret-Gentil, Laure
dc.contributor.authorBeja, Pedro
dc.contributor.authorBoggero, Angela
dc.contributor.authorBorja, Angel
dc.contributor.authorBouchez, Agnès
dc.contributor.authorCordier, Tristan
dc.contributor.authorDomaizon, Isabelle
dc.contributor.authorFeio, Maria Joao
dc.contributor.authorFilipe, Ana Filipa
dc.contributor.authorFornaroli, Ricardo
dc.contributor.authorGraf, Wolfram
dc.contributor.authorHerder, Jelger
dc.contributor.authorvan der Hoorn, Berry
dc.contributor.authorJones, J. Iwan
dc.contributor.authorSagova-Mareckova, Marketa
dc.contributor.authorMoritz, Christian
dc.contributor.authorBarquín, Jose
dc.contributor.authorPiggott, Jeremy J.
dc.contributor.authorPinna, Maurizio
dc.contributor.authorRimet, Frederic
dc.contributor.authorRinkevich, Buki
dc.contributor.authorSousa-Santos, Carla
dc.contributor.authorSpecchia, Valeria
dc.contributor.authorTrobajo, Rosa
dc.contributor.authorVasselon, Valentin
dc.contributor.authorVitecek, Simon
dc.contributor.authorZimmerman, Jonas
dc.contributor.authorWeigand, Alexander
dc.contributor.authorLeese, Florian
dc.contributor.authorKahlert, Maria
dc.contributor.otherAgrosistemes i Medi Ambientca
dc.date.accessioned2019-01-03T16:52:50Z
dc.date.available2019-01-03T16:52:50Z
dc.date.issued2018-05-22
dc.identifier.citationPawlowski, Jan, Mary Kelly-Quinn, Florian Altermatt, Laure Apothéloz-Perret-Gentil, Pedro Beja, Angela Boggero, and Angel Borja et al. 2018. "The Future Of Biotic Indices In The Ecogenomic Era: Integrating (E)DNA Metabarcoding In Biological Assessment Of Aquatic Ecosystems". Science Of The Total Environment 637-638: 1295-1310. Elsevier BV. doi:10.1016/j.scitotenv.2018.05.002.ca
dc.identifier.issn0048-9697ca
dc.identifier.urihttp://hdl.handle.net/20.500.12327/138
dc.description.abstractThe bioassessment of aquatic ecosystems is currently based on various biotic indices that use the occurrence and/or abundance of selected taxonomic groups to define ecological status. These conventional indices have some limitations, often related to difficulties in morphological identification of bioindicator taxa. Recent development of DNA barcoding and metabarcoding could potentially alleviate some of these limitations, by using DNA sequences instead of morphology to identify organisms and to characterize a given ecosystem. In this paper, we review the structure of conventional biotic indices, and we present the results of pilot metabarcoding studies using environmental DNA to infer biotic indices. We discuss the main advantages and pitfalls of metabarcoding approaches to assess parameters such as richness, abundance, taxonomic composition and species ecological values, to be used for calculation of biotic indices. We present some future developments to fully exploit the potential of metabarcoding data and improve the accuracy and precision of their analysis. We also propose some recommendations for the future integration of DNA metabarcoding to routine biomonitoring programs.ca
dc.format.extent16ca
dc.language.isoengca
dc.publisherElsevierca
dc.relation.ispartofScience of the Total Environmentca
dc.rightsAttribution-NonCommercial-NoDerivatives 4.0 Internationalca
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/4.0/*
dc.titleThe future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystemsca
dc.typeinfo:eu-repo/semantics/articleca
dc.description.versionreprintca
dc.embargo.termscapca
dc.relation.projectIDEC/H2020/COST Action CA15219/EU/Developing new genetic tools for bioassessment of aquatic ecosystems in Europe/DNAqua-Netca
dc.relation.projectIDEC/H2020/668981/EU/Capacity building at InBIO for Research and Innovation Using Envrionmental Metagenomics/EnvMetaGenca
dc.subject.udc574 - Ecologia general i biodiversitatca
dc.identifier.doihttps://doi.org/10.1016/j.scitotenv.2018.05.002ca
dc.contributor.groupAigües Marines i Continentalsca


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