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The value of gut microbiota to predict feed efficiency and growth of rabbits under different feeding regimes
(Nature Research, 2021-09-30)
Gut microbiota plays an important role in nutrient absorption and could impact rabbit feed efciency.
This study aims at investigating such impact by evaluating the value added by microbial information
for ...
A catalog of microbial genes from the bovine rumen unveils a specialized and diverse biomass-degrading environment
(Oxford University Press (OUP), 2020-05-30)
Background
The rumen microbiota provides essential services to its host and, through its role in ruminant production, contributes to human nutrition and food security. A thorough knowledge of the genetic ...
Genetic parameters and associated genomic regions for global immunocompetence and other health-related traits in pigs
(Nature Research, 2020-10-28)
The inclusion of health-related traits, or functionally associated genetic markers, in pig breeding programs could contribute to produce more robust and disease resistant animals. The aim of the present ...
Co-expression network analysis predicts a key role of microRNAs in the adaptation of the porcine skeletal muscle to nutrient supply
(BMC, 2020-01-17)
Background
The role of non-coding RNAs in the porcine muscle metabolism is poorly understood, with few studies investigating their expression patterns in response to nutrient supply. Therefore, we aimed ...
On the holobiont ‘predictome’ of immunocompetence in pigs
(BMC, 2023-05-01)
Background
Gut microbial composition plays an important role in numerous traits, including immune response. Integration of host genomic information with microbiome data is a natural step in the prediction ...
Leveraging host-genetics and gut microbiota to determine immunocompetence in pigs
(BMC, 2021-10-24)
Background: The gut microbiota infuences host performance playing a relevant role in homeostasis and function of
the immune system. The aim of the present work was to identify microbial signatures ...
Priming for welfare: gut microbiota is associated with equitation conditions and behavior in horse athletes
(Nature Research, 2020-05-20)
We simultaneously measured the fecal microbiota and multiple environmental and host-related variables in a cohort of 185 healthy horses reared in similar conditions during a period of eight months. The ...
Single-step genome-wide association study for social genetic effects and direct genetic effects on growth in Landrace pigs
(Nature Research, 2020-09-11)
In livestock social interactions, social genetic effects (SGE) represent associations between phenotype of one individual and genotype of another. Such associations occur when the trait of interest is ...
Mixed management in growing and finishing pigs: Differences between gender and their impacts on behavior, growth performance, and physiological parameters
(Public Library of Science, 2023-04-13)
Mixing, a common management strategy used to regroup pigs, has been reported to impair individual performance and affect pig welfare because of the establishment of a new social hierarchy after regrouping. ...
kernInt: A Kernel Framework for Integrating Supervised and Unsupervised Analyses in Spatio-Temporal Metagenomic Datasets
(Frontiers Media, 2021-01-28)
The advent of next-generation sequencing technologies allowed relative quantification of microbiome communities and their spatial and temporal variation. In recent years, supervised learning (i.e., ...