Search
Now showing items 1-8 of 8
Multilevel comparative bioinformatics to investigate evolutionary relationships and specificities in gene annotations: an example for tomato and grapevine
(BMC, 2018-11-30)
Background: “Omics” approaches may provide useful information for a deeper understanding of speciation events, diversification and function innovation. This can be achieved by investigating the molecular ...
A comprehensive genome variation map of melon identifies multiple domestication events and loci influencing agronomic traits
(Nature Research, 2019-11-01)
Melon is an economically important fruit crop that has been cultivated for thousands of years; however, the genetic basis and
history of its domestication still remain largely unknown. Here we report ...
Phenotypic and molecular selection of a superior Solanum pennellii introgression sub-line suitable for improving quality traits of cultivated tomatoes
(Frontiers Media, 2019-02-22)
The Solanum pennellii Introgression Line (IL) population can be exploited to identify favorable alleles that can improve yield and fruit quality traits in commercial tomato varieties. Over the past few ...
A phased genome of the highly heterozygous ‘Texas’ almond uncovers patterns of allele-specific expression linked to heterozygous structural variants
(Oxford University Press, 2024-04-09)
The vast majority of traditional almond varieties are self-incompatible, and the level of variability of the species is very high, resulting in a high-heterozygosity genome. Therefore, information on ...
An improved melon reference genome with single-molecule sequencing uncovers a recent burst of transposable elements with potential impact on genes
(Frontiers Media, 2020-01-31)
The published melon (Cucumis melo L.) reference genome assembly (v3.6.1) has still 41.6 Mb (Megabases) of sequences unassigned to pseudo-chromosomes and about 57 Mb of gaps. Although different approaches ...
An improved assembly and annotation of the melon (Cucumis melo L.) reference genome
(Nature Research, 2018-05-24)
We report an improved assembly (v3.6.1) of the melon (Cucumis melo L.) genome and a new genome annotation (v4.0). The optical mapping approach allowed correcting the order and the orientation of 21 ...
QTL Analyses in Multiple Populations Employed for the Fine Mapping and Identification of Candidate Genes at a Locus Affecting Sugar Accumulation in Melon (Cucumis melo L.)
(Frontiers Media, 2017-09-26)
Sugar content is the major determinant of both fruit quality and consumer acceptance in melon (Cucumis melo L), and is a primary target for crop improvement. Nearisogenic lines (NILs) derived from the ...
Genetic dissection of climacteric fruit ripening in a melon population segregating for ripening behavior
(Springer Nature, 2020-11-01)
Melon is as an alternative model to understand fruit ripening due to the coexistence of climacteric and non-climacteric varieties within the same species, allowing the study of the processes that regulate ...