Browsing ARTICLES CIENTÍFICS by Author "Kahlert, Maria"

Now showing items 1-5 of 5

    • Connecting the morphological and molecular species concepts to facilitate species identification within the genus Fragilaria (Bacillariophyta) 

      Kahlert, Maria; Kelly, Martyn G.; Mann, David G.; Rimet, Frédéric; Sato, Shinya; Bouchez, Agnès; Keck, François (Journal of Phycology, 2019-05-20) Aigües Marines i Continentals
      This paper explores the diversity and taxonomy of species within Fragilaria sensu stricto, an abundant and ecologically important diatom genus, taking advantage of cultured and DNA ‐barcoded material. ...

    • Diat.barcode, an open-access curated barcode library for diatoms 

      Rimet, Frédéric; Gusev, Evgenuy; Kahlert, Maria; Kelly, Martyn G.; Kulikovskiy, Maxim; Maltsev, Yevhen; Mann, David G.; Pfannkuchen, Martin; Trobajo, Rosa; Vasselon, Valentin; Zimmermann, Jonas; Bouchez, Agnès (Scientific Reports, 2019-10-22) Aigües Marines i Continentals
      Diatoms (Bacillariophyta) are ubiquitous microalgae which produce a siliceous exoskeleton and which make a major contribution to the productivity of oceans and freshwaters. They display a huge diversity, ...

    • Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life 

      Rimet, Frédéric; Aylagas, Eva; Borja, Angel; Bouchez, Agnès; Canino, Alexis; Chauvin, Christian; Chonova, Teofana; Ciampor Jr, Fedor; Costa, Filipe O.; Ferrari, Benoit J.D.; Gastineau, Romain; Goulon, Chloé; Gugger, Muriel; Holzmann, Maria; Jahn, Regine; Kahlert, Maria; Kusbert, Wolf-Henning; Laplace-Treyture, Christophe; Leese, Florian; Leliaert, Frederik; Mann, David G.; Marchand, Frédéric; Méléder, Vona; Pawlowski, Jan; Rasconi, Serena; Rivera, Sinziana; Rougerie, Rodolphe; Schweizer, Magali; Trobajo, Rosa; Vasselon, Valentin; Vivien, Régis; Weigand, Alexander; Witkowski, Andrzej; Zimmermann, Jonas; Ekrem, Torbjørn (Metabarcoding and Metagenomics (MBMG), 2021-02-26) Aigües Marines i Continentals
      DNA barcoding and metabarcoding is increasingly used to effectively and precisely assess and monitor biodiversity in aquatic ecosystems. As these methods rely on data availability and quality of barcode ...

    • The future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems 

      Pawlowski, Jan; Kelly-Quinn, Mary; Altermatt, Florian; Apothéloz-Perret-Gentil, Laure; Beja, Pedro; Boggero, Angela; Borja, Angel; Bouchez, Agnès; Cordier, Tristan; Domaizon, Isabelle; Feio, Maria Joao; Filipe, Ana Filipa; Fornaroli, Ricardo; Graf, Wolfram; Herder, Jelger; van der Hoorn, Berry; Jones, J. Iwan; Sagova-Mareckova, Marketa; Moritz, Christian; Barquín, Jose; Piggott, Jeremy J.; Pinna, Maurizio; Rimet, Frederic; Rinkevich, Buki; Sousa-Santos, Carla; Specchia, Valeria; Trobajo, Rosa; Vasselon, Valentin; Vitecek, Simon; Zimmerman, Jonas; Weigand, Alexander; Leese, Florian; Kahlert, Maria (Science of the Total Environment, 2018-05-22) Aigües Marines i Continentals
      The bioassessment of aquatic ecosystems is currently based on various biotic indices that use the occurrence and/or abundance of selected taxonomic groups to define ecological status. These conventional ...

    • The potential of High-Throughput Sequencing (HTS) of natural samples as a source of primary taxonomic information for reference libraries of diatom barcodes 

      Rimet, Frédéric; Abarca, Nelida; Bouchez, Agnès; Kusber, Wolf-Henning; Jahn, Regine; Kahlert, Maria; Keck, François; Kelly, Martyn G.; Mann, David G.; Piuz, André; Trobajo, Rosa; Tapolczai, Kalman; Vasselon, Valentin; Zimmermann, Jonas (Fottea, 2018-02-27) Aigües Marines i Continentals
      Diatoms are used routinely to assess pollution level in rivers and lakes. Current methods are based on identification by light microscopy, which is laborious. An alternative is to identify species based ...