IRTA Pubpro: Recent submissions

Now showing items 21-40 of 2899

    • Analysis of expressed sequence tags generated from full-length enriched cDNA libraries of melon 

      Clepet, Christian; Joobeur, Tarek; Zheng, Yi; Jublot, Delphine; Huang, Mingyun; Truniger, Veronica; Boualem, Adnane; Hernandez-Gonzalez, Maria Elena; Dolcet-Sanjuan, Ramon; Portnoy, Vitaly; Mascarell-Creus, Albert; Caño-Delgado, Ana I.; Katzir, Nurit; Bendahmane, Abdelhafid; Giovannoni, James J.; Aranda, Miguel A.; Garcia-Mas, Jordi; Fei, Zhangjun (BMC Genomics, 2011-05-20) Genòmica i Biotecnologia
      Background: Melon (Cucumis melo), an economically important vegetable crop, belongs to the Cucurbitaceae family which includes several other important crops such as watermelon, cucumber, and pumpkin. ...

    • Gut microbiome and resistome characterization of pigs treated with commonly used post-weaning diarrhea treatments 

      Guitart-Matas, Judith; Ballester, Maria; Fraile, Lorenzo; Darwich, Laila; Giler Baquerizo, Noemí; Tarres, Joaquim; López-Soria, Sergio; Ramayo-Caldas, Yuliaxis; Migura-Garcia, Lourdes (Animal Microbiome, 2024-05-03) Genètica i Millora Animal; Sanitat Animal
      Background The global burden of antimicrobial resistance demands additional measures to ensure the sustainable and conscious use of antimicrobials. For the swine industry, the post-weaning period is ...

    • Reproductive behaviour and fertilized spawns in cultured Solea senegalensis broodstock co-housed with wild breeders during their juvenile stages 

      González López, Wendy Ángela; Ramos-Júdez, Sandra; Duncan, Neil J. (General and Comparative Endocrinology, 2024-05-07) Aqüicultura
      The reproductive failure of Senegalese sole (Solea senegalensis) cultured males (reared entirely in captivity from egg through to adult) that do not participate in reproductive behaviours to fertilise ...

    • Comparative analysis of rosaceous genomes and the reconstruction of a putative ancestral genome for the family 

      Illa, Eudald; Sargent, Daniel J.; Lopez Girona, Elena; Bushakra, Jill; Cestaro, Alessandro; Crowhurst, Ross; Pindo, Massimo; Cabrera, Antonio; van der Knaap, Esther; Iezzoni, Amy; Gardiner, Susan; Velasco, Riccardo; Arús, Pere; Chagné, David; Troggio, Michela (BMC Ecology and Evolution, 2011-01-12) Genòmica i Biotecnologia
      Background: Comparative genome mapping studies in Rosaceae have been conducted until now by aligning genetic maps within the same genus, or closely related genera and using a limited number of common ...

    • Gene and QTL detection in a three-way barley cross under selection by a mixed model with kinship information using SNPs 

      Malosetti, Marcos; van Eeuwijk, Fred A.; Boer, Martin P.; Casas, Ana M.; Elía, Mónica; Moralejo, Marian; Bhat, Prasanna R.; Ramsay, Luke; Molina-Cano, José-Luis (Theoretical and Applied Genetics, 2011-03-04) Cultius Extensius Sostenibles
      Quantitative trait locus (QTL) detection is commonly performed by analysis of designed segregating populations derived from two inbred parental lines, where absence of selection, mutation and genetic ...

    • High moisture extrusion of pea protein isolate to mimic chicken texture: Instrumental and sensory insights 

      Barnés-Calle, Clara; Matas, Grau; Claret, Anna; Guerrero, Lluis; Fulladosa, Elena; Gou, Pere (Food Hydrocolloids, 2024-04-25) Qualitat i Tecnologia Alimentària
      High moisture extrusion processing (HMEP) is gaining attention in the plant-based food industry to obtain meat-like textures from different vegetal protein sources. The aim of this study was to evaluate ...

    • Cytokine profiles and phenotype regulation of antigen presenting cells by genotype-I porcine reproductive and respiratory syndrome virus isolates 

      Gimeno, Mariona; Darwich, Laila; Diaz, Ivan; de la Torre, Eugenia; Pujols, Joan; Martín, Marga; Inumaru, Shigeki; Cano, Esmeralda; Domingo, Mariano; Montoya, Maria; Mateu, Enric (Veterinary Research, 2011-01-18) Sanitat Animal
      The present study examined the immunological response of antigen presenting cells (APC) to genotype-I isolates of porcine reproductive and respiratory syndrome virus (PRRSV) infection by analysing the ...

    • Pathogenesis and transmissibility of highly (H7N1) and low (H7N9) pathogenic avian influenza virus infection in red-legged partridge (Alectoris rufa) 

      Bertran, Kateri; Pérez-Ramírez, Elisa; Busquets, Núria; Dolz, Roser; Ramis, Antonio; Darji, Ayub; Abad, Francesc Xavier; Valle, Rosa; Chaves, Aida; Vergara-Alert, Júlia; Barral, Marta; Höfle, Ursula; Majó, Natàlia (Veterinary Research, 2011-02-07) Sanitat Animal
      An experimental infection with highly pathogenic avian influenza virus (HPAIV) and low pathogenic avian influenza virus (LPAIV) was carried out in red-legged partridges (Alectoris rufa) in order to ...

    • Coordinated gene expression during gilthead sea bream skeletogenesis and its disruption by nutritional hypervitaminosis A 

      Fernández, Ignacio; Darias, Maria; Andree, Karl; Mazurais, David; Zambonino-Infante, Jose Luís; Gisbert, Enric (BMC Developmental Biology, 2011-02-09) Aqüicultura
      Background: Vitamin A (VA) has a key role in vertebrate morphogenesis, determining body patterning and growth through the control of cell proliferation and differentiation processes. VA regulates primary ...

    • Evaluation of alternative methods of tunnel composting (submitted by the European Composting Network) II 

      EFSA Panel on Biological Hazards (BIOHAZ); Koutsoumanis, Konstantinos; Allende, Ana; Bolton, Declan; Bover-Cid, Sara; Chemaly, Marianne; Herman, Lieve; Hilbert, Friederike; Lindqvist, Roland; Nauta, Maarten; Nonno, Romolo; Peixe, Luisa; Skandamis, Panagiotis; Ru, Giuseppe; Simmons, Marion; De Cesare, Alessandra; Fernandez Escamez, Pablo; Suffredini, Elisabetta; Ortiz-Pelaez, Angel; Alvarez Ordonez, Avelino (EFSA Journal, 2024-04-26) Funcionalitat i Seguretat Alimentària
      Two alternative methods for producing compost in a tunnel, from certain category (Cat.) 3 animal by-products (ABP) and other non-ABP material, were assessed. The first method proposed a minimum temperature ...

    • Elucidating the Onset of Cross-Protective Immunity after Intranasal Vaccination with the Attenuated African Swine Fever Vaccine Candidate BA71ΔCD2 

      Marín-Moraleda, David; Muñoz Basagoiti, Jordana; Tort-Miró, Aida; Navas, María Jesús; Muñoz, Marta; Vidal, Enric; Cobos, Àlex; Martín-Mur, Beatriz; Meas, Sochanwattey; Motuzova, Veronika; Chang, Chia-Yu; Gut, Marta; Accensi, Francesc; Pina-Pedrero, Sonia; Núñez, J Ignacio; Esteve-Codina, Anna; Gavrilov, Boris; Rodriguez, Fernando; Liu, Lihong; Argilaguet, Jordi (Vaccines, 2024-05-09) Sanitat Animal
      African swine fever (ASF) is a deadly disease of swine currently causing a worldwide pandemic, leading to severe economic consequences for the porcine industry. The control of disease spread is hampered ...

    • The genome of woodland strawberry (Fragaria vesca) 

      Shulaev, Vladimir; Sargent, Daniel J.; Crowhurst, Ross N.; Mockler, Todd C.; Folkerts, Otto; Delcher, Arthur L.; Jaiswal, Pankaj; Mockaitis, Keithanne; Liston, Aaron; Mane, Shrinivasrao P.; Burns, Paul; Davis, Thomas M.; Slovin, Janet P.; Bassil, Nahla; Hellens, Roger P.; Evans, Clive; Harkins, Tim; Kodira, Chinnappa; Desany, Brian; Crasta, Oswald R.; Jensen, Roderick V.; Allan, Andrew C.; Michael, Todd P.; Setubal, Joao Carlos; Celton, Jean-Marc; Rees, D. Jasper G.; Williams, Kelly P.; Holt, Sarah H.; Ruiz Rojas, Juan Jairo; Chatterjee, Mithu; Liu, Bo; Silva, Herman; Meisel, Lee; Adato, Avital; Filichkin, Sergei A.; Troggio, Michela; Viola, Roberto; Ashman, Tia-Lynn; Wang, Hao; Dharmawardhana, Palitha; Elser, Justin; Raja, Rajani; Priest, Henry D.; Bryant Jr., Douglas W.; Fox, Samuel E.; Givan, Scott A.; Wilhelm, Larry J.; Naithani, Sushma; Christoffels, Alan; Salama, David Y.; Carter, Jade; Lopez Girona, Elena; Zdepski, Anna; Wang, Wenqin; Kerstetter, Randall A.; Schwab, Wilfried; Korban, Schuyler S.; Davik, Jahn; Monfort, Amparo; Denoyes-Rothan, Beatrice; Arús, Pere; Mittler, Ron; Flinn, Barry; Aharoni, Asaph; Bennetzen, Jeffrey L.; Salzberg, Steven L.; Dickerman, Allan W.; Velasco, Riccardo; Borodovsky, Mark; Veilleux, Richard E.; Folta, Kevin M. (Nature Genetics, 2010-12-26) Genòmica i Biotecnologia
      The woodland strawberry, Fragaria vesca (2n = 2x = 14), is a versatile experimental plant system. This diminutive herbaceous  perennial has a small genome (240 Mb), is amenable to genetic transformat ...

    • The Gamma concept approach as a tool to predict fresh produce supporting or not the growth of L. monocytogenes 

      Gomez-Galindo, Marisa; Serra Castelló, Cristina; Bover-Cid, Sara; Truchado, Pilar; Gil, Maria I.; Allende, Ana (Food Microbiology, 2024-04-27) Funcionalitat i Seguretat Alimentària
      Challenge tests are commonly employed to evaluate the growth behavior of L. monocytogenes in food matrices; they are known for being expensive and time-consuming. An alternative could be the use of ...

    • Analysing the contribution of intermittent rivers to beta diversity can improve freshwater conservation in Mediterranean rivers 

      Soria, Maria; Cid, Núria; Ortega, Jean; Bini, Luis Mauricio; Acosta, Raúl; Gutiérrez-Cánovas, Cayetano; Rodríguez-Lozano, Pablo; Fortuño, Pau; Vinyoles, Dolors; Gallart, Francesc; Prat, Narcís; Bonada, Núria (Aquatic Sciences, 2024-04-25) Aigües Marines i Continentals
      In Mediterranean climate regions, intermittent rivers (IRs) harbor highly dynamic communities with species and trait composition changing over time and space. Simultaneously considering multiple ...

    • Modelling the spatial risk of malaria through probability distribution of Anopheles maculipennis s.l. and imported cases 

      Taheri, Shirin; González, Mikel Alexander; Ruiz-López, María José; Magallanes, Sergio; Delacour-Estrella, Sarah; Lucientes, Javier; Bueno-Marí, Rubén; Martínez-de la Puente, Josué; Bravo-Barriga, Daniel; Frontera, Eva; Polina, Alejandro; Martinez-Barciela, Yasmina; Pereira, José Manuel; Garrido, Josefina; Aranda, Carles; Marzal, Alfonso; Ruiz-Arrondo, Ignacio; Oteo, José Antonio; Ferraguti, Martina; Gutíerrez-López, Rafael; Estrada, Rosa; Miranda, Miguel Ángel; Barceló, Carlos; Morchón, Rodrigo; Montalvo, Tomas; Gangoso, Laura; Goiri, Fátima; García-Pérez, Ana L.; Ruiz, Santiago; Fernandez-Martinez, Beatriz; Gómez-Barroso, Diana; Figuerola, Jordi (Emerging Microbes & Infections, 2024-05-02) Sanitat Animal
      Malaria remains one of the most important infectious diseases globally due to its high incidence and mortality rates. The influx of infected cases from endemic to non-endemic malaria regions like Europe ...

    • Re-evaluation of certain aspects of the EFSA Scientific Opinion of April 2010 on risk assessment of parasites in fishery products, based on new scientific data. Part 1: ToRs1–3 

      EFSA Panel on Biological Hazards (BIOHAZ); Koutsoumanis, Konstantinos; Allende, Ana; Alvarez-Ordóñez, Avelino; Bover-Cid, Sara; Chemaly, Marianne; De Cesare, Alessandra; Herman, Lieve; Hilbert, Friederike; Lindqvist, Roland; Nauta, Maarten; Nonno, Romolo; Peixe, Luisa; Ru, Giuseppe; Simmons, Marion; Skandamis, Panagiotis; Suffredini, Elisabetta; Buchmann, Kurt; Careche, Mercedes; Levsen, Arne; Mattiucci, Simonetta; Mladineo, Ivona; Santos, Maria João; Barcia-Cruz, Rubén; Broglia, Alesandro; Chuzhakina, Kateryna; Goudjihounde, Sonagnon Martin; Guerra, Beatriz; Messens, Winy; Muñoz Guajardo, Irene; Bolton, Declan (EFSA Journal, 2024-04-22) Funcionalitat i Seguretat Alimentària
      Surveillance data published since 2010, although limited, showed that there is no evidence of zoonotic parasite infection in market quality Atlantic salmon, marine rainbow trout, gilthead seabream, ...

    • Vaccination of poultry against highly pathogenic avian influenza – Part 2. Surveillance and mitigation measures 

      EFSA Panel on Animal Health and Animal Welfare (AHAW); European Union Reference Laboratory for Avian Influenza; Nielsen, Søren Saxmose; Alvarez, Julio; Bicout, Dominique Joseph; Calistri, Paolo; Canali, Elisabetta; Drewe, Julian Ashley; Garin-Bastuji, Bruno; Gortázar, Christian; Herskin, Mette S.; Michel, Virginie; Miranda Chueca, Miguel Ángel; Padalino, Barbara; Roberts, Helen Clare; Spoolder, Hans; Stahl, Karl; Velarde, Antonio; Viltrop, Arvo; Winckler, Christoph; Bortolami, Alessio; Guinat, Claire; Harder, Timm; Stegeman, Arjan; Terregino, Calogero; Lanfranchi, Barbara; Preite, Ludovica; Aznar, Inma; Broglia, Alessandro; Baldinelli, Francesca; Gonzales Rojas, Jose Luis (EFSA Journal, 2024-04-18) Benestar Animal
      Selecting appropriate diagnostic methods that take account of the type of vaccine used is important when implementing a vaccination programme against highly pathogenic avian influenza (HPAI). If vaccination ...

    • Differential interactions of virulent and non-virulent H. parasuis strains with naïve or swine influenza virus pre-infected dendritic cells 

      Mussá, Tufária; Rodríguez-Cariño, Carolina; Sánchez-Chardi, Alejandro; Baratelli, Massimiliano; Costa-Hurtado, Mar; Fraile, Lorenzo; Domínguez, Javier; Aragon, Virginia; Montoya, Maria (Veterinary Research, 2012-11-16) Sanitat Animal
      Pigs possess a microbiota in the upper respiratory tract that includes Haemophilus parasuis. Pigs are also considered the reservoir of influenza viruses and infection with this virus commonly results ...

    • Genetic improvement of bread wheat yield and associated traits in Spain during the 20th century 

      Sánchez-García, M.; Royo, Conxita; Aparicio, N.; Martín-Sánchez, J.A.; Álvaro, Fanny (Journal of Agricultural Science, 2012-04-17) Cultius Extensius Sostenibles
      A collection of 26 wheat genotypes widely grown in Spain during the 20th century was evaluated in eight contrasting environments in order to quantify breeding achievements in yield and associated traits. ...

    • Seasonal changes of whole root system conductance by a drought-tolerant grape root system 

      Alsina, Maria Mar; Smart, David R.; Bauerle, Taryn; de Herralde, Felicidad; Biel, Carmen; Stockert, Christine; Negron, Claudia; Savé, Robert (Journal of Experimental Botany, 2010-09-17) Fructicultura; Protecció Vegetal Sostenible
      The role of root systems in drought tolerance is a subject of very limited information compared with above-ground responses. Adjustments to the ability of roots to supply water relative to shoot ...