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Exploring deep learning for complex trait genomic prediction in polyploid outcrossing species
(Frontiers Media, 2020-02-06)
Genomic prediction (GP) is the procedure whereby the genetic merits of untested candidates are predicted using genome wide marker information. Although numerous examples of GP exist in plants and animals, ...
Effect of root colonization by arbuscular mycorrhizal fungi on growth, Productivity and blast resistance in rice
(SpringerOpen, 2020-06-22)
Background
Arbuscular mycorrhizal (AM) fungi form symbiotic associations with roots in most land plants. AM symbiosis provides benefits to host plants by improving nutrition and fitness. AM symbiosis ...
The apple REFPOP—a reference population for genomics-assisted breeding in apple
(Springer Nature, 2020-11-01)
Breeding of apple is a long-term and costly process due to the time and space requirements for screening selection candidates. Genomics-assisted breeding utilizes genomic and phenotypic information ...
Comparative QTL analysis in peach ‘Earlygold’ F2 and backcross progenies
(Elsevier, 2021-11-17)
Based on detailed maps, DNA sequences and phenotypic data, there is a great deal of information on the genetics and genomics of ‘Earlygold’, a historical peach cultivar from the US. The F2 between ‘Texas’ ...
Biochemical and genetic implications of the slow ripening phenotype in peach fruit
(Elsevier, 2019-09-14)
The peach [Prunus persica L. (Batsch)] slow ripening (SR) trait is a mutation preventing the normal fruit ripening process. It is determined by a single Mendelian gene (Sr/sr) located on linkage group ...
Environmentally driven transcriptomic and metabolic changes leading to color differences in “Golden Reinders” apples
(Frontiers Media, 2022-08-01)
Apple is characterized by its high adaptation to diverse growing environments.
However, little is still known about how different environments can regulate
at the metabolic or molecular level specific ...
Identification of strong candidate genes for backfat and intramuscular fatty acid composition in three crosses based on the Iberian pig
(Nature Research, 2020-08-18)
Meat quality has an important genetic component and can be modified by the fatty acid (FA) composition and the amount of fat contained in adipose tissue and muscle. The present study aimed to find genomic ...
Resynthesis: Marker-Based Partial Reconstruction of Elite Genotypes in Clonally-Reproducing Plant Species
(Frontiers Media, 2020-08-07)
We propose a method for marker-based selection of cultivars of clonally-reproducing plant species which keeps the basic genetic architecture of a top-performing cultivar (usually a partly heterozygous ...
Inheritance and QTL analysis of chilling and heat requirements for flowering in an interspecific almond x peach (Texas x Earlygold) F2 population
(Euphytica, 2020-03-04)
Blooming in temperate fruit species is triggered by chilling and heat requirements (CR and HR), with a wide range of requirements within the same species. CR for flower bud dormancy release has become ...
CmVPS41 Is a General Gatekeeper for Resistance to Cucumber Mosaic Virus Phloem Entry in Melon
(Frontiers Media, 2019-10-01)
Melon production is often compromised by viral diseases, which cannot be treated with chemicals. Therefore, the use of genetic resistances is the main strategy for generating crops resistant to viruses. ...