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A deletion affecting an LRR-RLK gene co-segregates with the fruit flat shape trait in peach
(Nature Research, 2017-07-27)
In peach, the fat phenotype is caused by a partially dominant allele in heterozygosis (Ss), fruits from
homozygous trees (SS) abort a few weeks after fruit setting. Previous research has identifed a ...
Fruit Morphology and Ripening-Related QTLs in a Newly Developed Introgression Line Collection of the Elite Varieties ‘Védrantais’ and ‘Piel de Sapo’
(MDPI, 2022-11-15)
Melon is an economically important crop with widely diverse fruit morphology and ripening characteristics. Its diploid sequenced genome and multiple genomic tools make this species suitable to study the ...
A mutation in the melon Vacuolar Protein Sorting 41prevents systemic infection of Cucumber mosaic virus
(Nature Research, 2017-09-05)
In the melon exotic accession PI 161375, the gene cmv1, confers recessive resistance to Cucumber
mosaic virus (CMV) strains of subgroup II. cmv1 prevents the systemic infection by restricting the ...
Almond population genomics and non-additive GWAS reveal new insights into almond dissemination history and candidate genes for nut traits and blooming time
(Oxford University Press, 2023-09-25)
Domestication drastically changed crop genomes, fixing alleles of interest and creating different genetic populations. Genome-wide
association studies (GWASs) are a powerful tool to detect these alleles ...
Exploring deep learning for complex trait genomic prediction in polyploid outcrossing species
(Frontiers Media, 2020-02-06)
Genomic prediction (GP) is the procedure whereby the genetic merits of untested candidates are predicted using genome wide marker information. Although numerous examples of GP exist in plants and animals, ...
Effect of root colonization by arbuscular mycorrhizal fungi on growth, Productivity and blast resistance in rice
(SpringerOpen, 2020-06-22)
Background
Arbuscular mycorrhizal (AM) fungi form symbiotic associations with roots in most land plants. AM symbiosis provides benefits to host plants by improving nutrition and fitness. AM symbiosis ...
The apple REFPOP—a reference population for genomics-assisted breeding in apple
(Springer Nature, 2020-11-01)
Breeding of apple is a long-term and costly process due to the time and space requirements for screening selection candidates. Genomics-assisted breeding utilizes genomic and phenotypic information ...
Comparative QTL analysis in peach ‘Earlygold’ F2 and backcross progenies
(Elsevier, 2021-11-17)
Based on detailed maps, DNA sequences and phenotypic data, there is a great deal of information on the genetics and genomics of ‘Earlygold’, a historical peach cultivar from the US. The F2 between ‘Texas’ ...
Environmentally driven transcriptomic and metabolic changes leading to color differences in “Golden Reinders” apples
(Frontiers Media, 2022-08-01)
Apple is characterized by its high adaptation to diverse growing environments.
However, little is still known about how different environments can regulate
at the metabolic or molecular level specific ...
Resynthesis: Marker-Based Partial Reconstruction of Elite Genotypes in Clonally-Reproducing Plant Species
(Frontiers Media, 2020-08-07)
We propose a method for marker-based selection of cultivars of clonally-reproducing plant species which keeps the basic genetic architecture of a top-performing cultivar (usually a partly heterozygous ...