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dc.contributor.authorNieuwenhuijse, David F.
dc.contributor.authorOude Munnink, Bas B.
dc.contributor.authorPhan, Mi V. T.
dc.contributor.authorthe Global Sewage Surveillance project consortium
dc.contributor.authorCerdà-Cuéllar, Marta
dc.contributor.authorMunk, Patrick
dc.contributor.authorVenkatakrishnan, Shweta
dc.contributor.authorAarestrup, Frank M.
dc.contributor.authorCotten, Matthew
dc.contributor.authorKoopmans, Marion P. G.
dc.contributor.otherProducció Animalca
dc.date.accessioned2020-12-10T16:43:59Z
dc.date.available2020-12-10T16:43:59Z
dc.date.issued2020-08-13
dc.identifier.citationNieuwenhuijse, David F., Bas B. Oude Munnink, My V. T. Phan, Patrick Munk, Shweta Venkatakrishnan, Frank M. Aarestrup, Matthew Cotten, and Marion P. G. Koopmans. 2020. "Setting A Baseline For Global Urban Virome Surveillance In Sewage". Scientific Reports 10 (1). doi:10.1038/s41598-020-69869-0.ca
dc.identifier.issn2045-2322ca
dc.identifier.urihttp://hdl.handle.net/20.500.12327/1013
dc.description.abstractThe rapid development of megacities, and their growing connectedness across the world is becoming a distinct driver for emerging disease outbreaks. Early detection of unusual disease emergence and spread should therefore include such cities as part of risk-based surveillance. A catch-all metagenomic sequencing approach of urban sewage could potentially provide an unbiased insight into the dynamics of viral pathogens circulating in a community irrespective of access to care, a potential which already has been proven for the surveillance of poliovirus. Here, we present a detailed characterization of sewage viromes from a snapshot of 81 high density urban areas across the globe, including in-depth assessment of potential biases, as a proof of concept for catch-all viral pathogen surveillance. We show the ability to detect a wide range of viruses and geographical and seasonal differences for specific viral groups. Our findings offer a cross-sectional baseline for further research in viral surveillance from urban sewage samples and place previous studies in a global perspective.ca
dc.format.extent13ca
dc.language.isoengca
dc.publisherNature Researchca
dc.relation.ispartofScientific Reportsca
dc.rightsAttribution 4.0 Internationalca
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/*
dc.titleSetting a baseline for global urban virome surveillance in sewageca
dc.typeinfo:eu-repo/semantics/articleca
dc.description.versioninfo:eu-repo/semantics/publishedVersionca
dc.rights.accessLevelinfo:eu-repo/semantics/openAccess
dc.embargo.termscapca
dc.relation.projectIDEC/H2020/643476/EU/Collaborative Management Platform for detection and Analyses of (Re-)emerging and foodborne outbreaks in Europe/COMPAREca
dc.subject.udc619ca
dc.identifier.doihttps://doi.org/10.1038/s41598-020-69869-0ca
dc.contributor.groupSanitat Animalca


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Except where otherwise noted, this item's license is described as http://creativecommons.org/licenses/by/4.0/