dc.contributor.author | Shulaev, Vladimir | |
dc.contributor.author | Sargent, Daniel J. | |
dc.contributor.author | Crowhurst, Ross N. | |
dc.contributor.author | Mockler, Todd C. | |
dc.contributor.author | Folkerts, Otto | |
dc.contributor.author | Delcher, Arthur L. | |
dc.contributor.author | Jaiswal, Pankaj | |
dc.contributor.author | Mockaitis, Keithanne | |
dc.contributor.author | Liston, Aaron | |
dc.contributor.author | Mane, Shrinivasrao P. | |
dc.contributor.author | Burns, Paul | |
dc.contributor.author | Davis, Thomas M. | |
dc.contributor.author | Slovin, Janet P. | |
dc.contributor.author | Bassil, Nahla | |
dc.contributor.author | Hellens, Roger P. | |
dc.contributor.author | Evans, Clive | |
dc.contributor.author | Harkins, Tim | |
dc.contributor.author | Kodira, Chinnappa | |
dc.contributor.author | Desany, Brian | |
dc.contributor.author | Crasta, Oswald R. | |
dc.contributor.author | Jensen, Roderick V. | |
dc.contributor.author | Allan, Andrew C. | |
dc.contributor.author | Michael, Todd P. | |
dc.contributor.author | Setubal, Joao Carlos | |
dc.contributor.author | Celton, Jean-Marc | |
dc.contributor.author | Rees, D. Jasper G. | |
dc.contributor.author | Williams, Kelly P. | |
dc.contributor.author | Holt, Sarah H. | |
dc.contributor.author | Ruiz Rojas, Juan Jairo | |
dc.contributor.author | Chatterjee, Mithu | |
dc.contributor.author | Liu, Bo | |
dc.contributor.author | Silva, Herman | |
dc.contributor.author | Meisel, Lee | |
dc.contributor.author | Adato, Avital | |
dc.contributor.author | Filichkin, Sergei A. | |
dc.contributor.author | Troggio, Michela | |
dc.contributor.author | Viola, Roberto | |
dc.contributor.author | Ashman, Tia-Lynn | |
dc.contributor.author | Wang, Hao | |
dc.contributor.author | Dharmawardhana, Palitha | |
dc.contributor.author | Elser, Justin | |
dc.contributor.author | Raja, Rajani | |
dc.contributor.author | Priest, Henry D. | |
dc.contributor.author | Bryant Jr., Douglas W. | |
dc.contributor.author | Fox, Samuel E. | |
dc.contributor.author | Givan, Scott A. | |
dc.contributor.author | Wilhelm, Larry J. | |
dc.contributor.author | Naithani, Sushma | |
dc.contributor.author | Christoffels, Alan | |
dc.contributor.author | Salama, David Y. | |
dc.contributor.author | Carter, Jade | |
dc.contributor.author | Lopez Girona, Elena | |
dc.contributor.author | Zdepski, Anna | |
dc.contributor.author | Wang, Wenqin | |
dc.contributor.author | Kerstetter, Randall A. | |
dc.contributor.author | Schwab, Wilfried | |
dc.contributor.author | Korban, Schuyler S. | |
dc.contributor.author | Davik, Jahn | |
dc.contributor.author | Monfort, Amparo | |
dc.contributor.author | Denoyes-Rothan, Beatrice | |
dc.contributor.author | Arús, Pere | |
dc.contributor.author | Mittler, Ron | |
dc.contributor.author | Flinn, Barry | |
dc.contributor.author | Aharoni, Asaph | |
dc.contributor.author | Bennetzen, Jeffrey L. | |
dc.contributor.author | Salzberg, Steven L. | |
dc.contributor.author | Dickerman, Allan W. | |
dc.contributor.author | Velasco, Riccardo | |
dc.contributor.author | Borodovsky, Mark | |
dc.contributor.author | Veilleux, Richard E. | |
dc.contributor.author | Folta, Kevin M. | |
dc.contributor.other | Producció Vegetal | ca |
dc.date.accessioned | 2024-05-10T12:32:09Z | |
dc.date.available | 2024-05-10T12:32:09Z | |
dc.date.issued | 2010-12-26 | |
dc.identifier.citation | Shulaev, Vladimir, Daniel J. Sargent, Ross Crowhurst, Todd C. Mockler, Otto Folkerts, Arthur L. Delcher, Pankaj Jaiswal, et al. 2010. “The Genome of Woodland Strawberry (Fragaria Vesca).” Nature Genetics 43 (2): 109–116. doi:10.1038/ng.740 | ca |
dc.identifier.issn | 1061-4036 | ca |
dc.identifier.uri | http://hdl.handle.net/20.500.12327/2979 | |
dc.description.abstract | The woodland strawberry, Fragaria vesca (2n = 2x = 14), is a versatile experimental plant system. This diminutive herbaceous
perennial has a small genome (240 Mb), is amenable to genetic transformation and shares substantial sequence identity with the
cultivated strawberry (Fragaria × ananassa) and other economically important rosaceous plants. Here we report the draft F. vesca
genome, which was sequenced to ×39 coverage using second-generation technology, assembled de novo and then anchored to the
genetic linkage map into seven pseudochromosomes. This diploid strawberry sequence lacks the large genome duplications seen in
other rosids. Gene prediction modeling identified 34,809 genes, with most being supported by transcriptome mapping. Genes critical
to valuable horticultural traits including flavor, nutritional value and flowering time were identified. Macrosyntenic relationships
between Fragaria and Prunus predict a hypothetical ancestral Rosaceae genome that had nine chromosomes. New phylogenetic
analysis of 154 protein-coding genes suggests that assignment of Populus to Malvidae, rather than Fabidae, is warranted. | ca |
dc.description.sponsorship | This work was supported by Roche and 454 Sequencing; the Virginia Bioinformatics Institute; the University of Florida Institute of Food and Agricultural Sciences (IFAS) Dean for Research; the University of Florida Strawberry Breeding Program; The Province of Trento, Italy (to R.V.); Driscoll’s Strawberry Associates; United States Department of Agriculture/Cooperative State Research, Education and Extension Service (USDA/CSREES) Hatch Project VA-135816 (to B.F.); Rutgers Busch Biomedical Funding (to T.P.M.); East Malling Trust (EMT) and Biotechnology and Biological Sciences Research Council (BBSRC) (to D.J.S. and E.L.G.); the Oregon State Agricultural Research Foundation #ARF4435 (to T.C.M.); the Oregon State Computational and Genome Biology Initiative (to T.C.M.); Oregon State University start-up fund (to P.J.); the Center for Genomics and Bioinformatics, supported in part by the METACyt Initiative of Indiana University (to K.M.); US National Institutes of Health (grant HG00783; to M.B.); USDA-CSREES National Research Initiative (NRI) Plant Genome Grant 2008-35300-04411 and New Hampshire Agricultural Experiment Station Project NH00535 (to T.M.D.); and USDA/ARS CRIS #1275- 21000-180-01R (to J.P.S.). | ca |
dc.format.extent | 10 | ca |
dc.language.iso | eng | ca |
dc.publisher | Nature Research | ca |
dc.relation.ispartof | Nature Genetics | ca |
dc.rights | Attribution-NonCommercial-ShareAlike 4.0 International | * |
dc.rights.uri | http://creativecommons.org/licenses/by-nc-sa/4.0/ | * |
dc.title | The genome of woodland strawberry (Fragaria vesca) | ca |
dc.type | info:eu-repo/semantics/article | ca |
dc.description.version | info:eu-repo/semantics/publishedVersion | ca |
dc.rights.accessLevel | info:eu-repo/semantics/openAccess | |
dc.embargo.terms | cap | ca |
dc.subject.udc | 575 | ca |
dc.subject.udc | 633 | ca |
dc.identifier.doi | https://doi.org/10.1038/ng.740 | ca |
dc.contributor.group | Genòmica i Biotecnologia | ca |