Browsing PUBLICACIONS CIENTÍFIQUES by Author "Gabaldón, Toni"
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A comprehensive genome variation map of melon identifies multiple domestication events and loci influencing agronomic traits
Zhao, Guangwei; Lian, Qun; Zhang, Zhonghua; Fu, Qiushi; He, Yuhua; Ma, Shuangwu; Ruggieri, Valentino; Monforte, Antonio J.; Wang, Pingyong; Julca, Irene; Wang, Huaisong; Liu, Junpu; Xu, Yong; Wang, Runze; Ji, Jiabing; Xu, Zhihong; Kong, Weihu; Zhong, Yang; Shang, Jianli; Pereira, Lara; Argyris, Jason; Zhang, Jian; Mayobre, Carlos; Pujol, Marta; Oren, Elad; Ou, Diandian; Wang, Jiming; Sun, Dexi; Zhao, Shengjie; Zhu, Yingchun; Li, Na; Katzir, Nurit; Gur, Amit; Dogimont, Catherine; Schaefer, Hanno; Fan, Wei; Bendahmane, Abdelhafid; Fei, Zhangjun; Pitrat, Michel; Gabaldón, Toni; Lin, Tao; Garcia-Mas, Jordi; Xu, Yongyang; Huang, Sanwen (Nature Genetics, 2019-11-01) Genòmica i BiotecnologiaMelon is an economically important fruit crop that has been cultivated for thousands of years; however, the genetic basis and history of its domestication still remain largely unknown. Here we report ... -
Comparative Genomics Used to Predict Virulence Factors and Metabolic Genes among Monilinia Species
Marcet-Houben, Marina; Villarino, Maria; Vilanova, Laura; De Cal, Antonieta; Van Kan, Jan A. L.; Usall, Josep; Gabaldón, Toni; Torres, Rosario (Journal of Fungi (JoF), 2021-06-08) PostcollitaBrown rot, caused by Monilinia spp., is among the most important diseases in stonefruits, and some pome fruits (mainly apples). This disease is responsible for significant yield losses,particularly in ... -
Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes
Vlasova, Anna; Capella-Gutiérrez, Salvador; Rendón-Anaya, Martha; Hernández-Oñate, Miguel; Minoche, André E.; Erb, Ionas; Câmara, Francisco; Prieto-Barja, Pablo; Corvelo, André; Sanseverino, Walter; Westergaard, Gastón; Dohm, Juliane C.; Pappas Jr, Georgios J.; Saburido-Alvarez, Soledad; Kedra, Darek; Gonzalez, Irene; Cozzuto, Luca; Gómez-Garrido, Jessica; Aguilar-Morón, María A.; Andreu, Nuria; Aguilar, O. Mario; Garcia-Mas, Jordi; Zehnsdorf, Maik; Vázquez, Martín P.; Delgado-Salinas, Alfonso; Delaye, Luis; Lowy, Ernesto; Mentaberry, Alejandro; Vianello-Brondani, Rosana P.; García, José Luís; Alioto, Tyler; Sánchez, Federico; Himmelbauer, Heinz; Santalla, Marta; Notredame, Cedric; Gabaldón, Toni; Herrera-Estrella, Alfredo; Guigó, Roderic (Genome Biology, 2016-02-25) Genòmica i BiotecnologiaBackground: Legumes are the third largest family of angiosperms and the second most important crop class. Legume genomes have been shaped by extensive large-scale gene duplications, including an ... -
Genome Sequence of the Brown Rot Fungal Pathogen Monilinia laxa
Naranjo-Ortíz, Miguel A.; Rodríguez-Píres, Silvia; Torres, Rosario; De Cal, Antonieta; Usall, Josep; Gabaldón, Toni (Genome Announcements, 2018-04-26) PostcollitaMonilinia laxa (phylum Ascomycota) is a plant pathogen responsible for the brown rot blossom blight disease in stone fruit trees of the Rosaceae family, such as apricots. We report here the genome ... -
Transposons played a major role in the diversification between the closely related almond and peach genomes: Results from the almond genome sequence
Alioto, Tyler; Alexiou, Konstantinos G.; Bardil, Amélie; Barteri, Fabio; Castanera, Raúl; Cruz, Fernando; Dhingra, Amit; Duval, Henri; Fernández i Martí, Ángel; Frias, Leonor; Galán, Beatriz; Garcia, José L.; Howad, Werner; Gómez-Garrido, Jèssica; Gut, Marta; Julca, Irene; Morata, Jordi; Puigdomènech, Pere; Ribeca, Paolo; Rubio Cabetas, María José; Vlasova, Anna; Wirthensohn, Michelle; Garcia-Mas, Jordi; Gabaldón, Toni; Casacuberta, Josep M.; Arús, Pere (Plant Journal, 2019-09-16) Genòmica i BiotecnologiaWe sequenced the genome of the highly heterozygous almond Prunus dulcis cv. Texas combining short and long‐read sequencing. We obtained a genome assembly totaling 227.6 Mb of the estimated 238 Mb almond ...