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High-density multi-population consensus genetic linkage map for peach
(Public Library of Science, 2018-11-21)
Highly saturated genetic linkage maps are extremely helpful to breeders and are an essential prerequisite for many biological applications such as the identification of marker-trait associations, mapping ...
A deletion affecting an LRR-RLK gene co-segregates with the fruit flat shape trait in peach
(Nature Research, 2017-07-27)
In peach, the fat phenotype is caused by a partially dominant allele in heterozygosis (Ss), fruits from
homozygous trees (SS) abort a few weeks after fruit setting. Previous research has identifed a ...
A cryptic variation in a member of the Ovate Family Proteins is underlying the melon fruit shape QTL fsqs8.1
(Springer, 2021-11-25)
Melon cultivars have a wide range of fruit morphologies. Quantitative trait loci (QTL) have been identifed underlying such diversity. This research focuses on the fruit shape QTL fsqs8.1, previously ...
The haplotype-resolved T2T reference genome highlights structural variation underlying agronomic traits of melon
(Oxford University Press, 2023-09-04)
Melon (Cucumis melo L.) is an important vegetable crop that has an extensive history of cultivation. However, the genome of wild and semi-wild melon types that can be used for the analysis of agronomic ...
Metabolomic analyses of highbush blueberry (Vaccinium corymbosum L.) cultivars revealed mechanisms of resistance to aluminum toxicity
(Elsevier, 2020-12-02)
Aluminum (Al) is an important factor that limits plant growth under acidic soil conditions. However, several
plant species developed distinct mechanisms that limit the damage caused by high Al ...
High-throughput methods to identify male Cannabis sativa using various genotyping methods
(BMC, 2022-11-02)
Background
Cannabis sativa is a primarily dioecious angiosperm that exhibits sexual developmental plasticity. Developmental genes for staminate male flowers have yet to be elucidated; however, there ...
Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes
(BMC, 2016-02-25)
Background: Legumes are the third largest family of angiosperms and the second most important crop class. Legume genomes have been shaped by extensive large-scale gene duplications, including an ...
A phased genome of the highly heterozygous ‘Texas’ almond uncovers patterns of allele-specific expression linked to heterozygous structural variants
(Oxford University Press, 2024-04-09)
The vast majority of traditional almond varieties are self-incompatible, and the level of variability of the species is very high, resulting in a high-heterozygosity genome. Therefore, information on ...
Whole-Genome Analysis of Diversity and SNP-Major Gene Association in Peach Germplasm
(Public Library of Science, 2015-09-09)
Peach was domesticated in China more than four millennia ago and from there it spread world-wide. Since the middle of the last century, peach breeding programs have been very dynamic generating hundreds ...
An efficient CRISPR-Cas9 enrichment sequencing strategy for characterizing complex and highly duplicated genomic regions. A case study in the Prunus salicina LG3-MYB10 genes cluster
(BMC, 2022-08-27)
Background: Genome complexity is largely linked to diversifcation and crop innovation. Examples of regions with duplicated genes with relevant roles in agricultural traits are found in many crops. In ...