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Now showing items 11-20 of 37
Inheritance of Fruit Red-Flesh Patterns in Peach
(MDPI, 2023-01-14)
Fruit color is an important trait in peach from the point of view of consumer preference, nutritional content, and diversification of fruit typologies. Several genes and phenotypes have been described ...
GenoDrawing: An Autoencoder Framework for Image Prediction from SNP Markers
(American Association for the Advancement of Science; Nanjing Agricultural University, 2023-11-03)
Advancements in genome sequencing have facilitated whole genome characterization of numerous plant species, providing an abundance of genotypic data for genomic analysis. Genomic selection and neural ...
Woodland strawberry axillary bud fate is dictated by a crosstalk of environmental and endogenous factors
(American Society of Plant Biologists, 2021-09-01)
Plant architecture is defined by fates and positions of meristematic tissues and has direct consequences on yield potential and environmental adaptation of the plant. In strawberries (Fragaria vesca L. ...
An association analysis between a polymorphism in the SEC24A gene and lipid traits recorded in Duroc pigs
(Taylor & Francis Open Access, 2021-10-05)
By regulating the expression of low-density lipoprotein receptors (LDLR), the SEC24A protein modulates the clearance of plasma cholesterol in mice. The whole-genome sequencing of five Duroc boars that ...
Genetic regulation of volatile production in two melon introgression line collections with contrasting ripening behavior
(Oxford University Press, 2024-01-16)
The importance of melon aroma in determining fruit quality has been highlighted in recent years. The fruit volatile profile is influenced by the type of fruit ripening. Non-climacteric fruits contain ...
Construction of a collection of introgression lines of “Texas” almond DNA fragments in the “Earlygold” peach genetic background
(Oxford University Press, 2022-03-23)
Peach [Prunus persica L. Batsch] is one of the major temperate fruit tree species, the commercial materials of which have a low level of genetic variability. Almond [P. dulcis (Mill) DA Webb], a close ...
Genomic analysis of fruit size and shape traits in apple: unveiling candidate genes through GWAS analysis
(Oxford University Press, 2023-12-19)
Genomic tools facilitate the efficient selection of improved genetic materials within a breeding program. Here, we focus on two apple fruit quality traits: shape and size. We utilized data from 11 fruit ...
Modeling microRNA-driven post-transcriptional regulation using exon–intron split analysis in pigs
(Wiley, 2022-07-10)
The contribution of microRNAs (miRNAs) to mRNA post-transcriptional regulation has often been explored by the post hoc selection of downregulated genes and determining whether they harbor binding sites ...
A phased genome of the highly heterozygous ‘Texas’ almond uncovers patterns of allele-specific expression linked to heterozygous structural variants
(Oxford University Press, 2024-04-09)
The vast majority of traditional almond varieties are self-incompatible, and the level of variability of the species is very high, resulting in a high-heterozygosity genome. Therefore, information on ...
An efficient CRISPR-Cas9 enrichment sequencing strategy for characterizing complex and highly duplicated genomic regions. A case study in the Prunus salicina LG3-MYB10 genes cluster
(BMC, 2022-08-27)
Background: Genome complexity is largely linked to diversifcation and crop innovation. Examples of regions with duplicated genes with relevant roles in agricultural traits are found in many crops. In ...