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QTL mapping of melon fruit quality traits using a high-density GBS-based genetic map
(BMC, 2018-12-04)
Background
Melon shows a broad diversity in fruit morphology and quality, which is still underexploited in breeding programs. The knowledge of the genetic basis of fruit quality traits is important for ...
Editorial: Translational research for cucurbit molecular breeding: Traits, markers, and genes
(Frontiers Media, 2020-11-30)
Cucurbits (family Cucurbitaceae) are economically important vegetable crops. Major cucurbits growing globally include cucumber, melon, watermelon, and squash/pumpkin. Other cucurbits like bitter melon, ...
An efficient CRISPR-Cas9 enrichment sequencing strategy for characterizing complex and highly duplicated genomic regions. A case study in the Prunus salicina LG3-MYB10 genes cluster
(BMC, 2022-08-27)
Background: Genome complexity is largely linked to diversifcation and crop innovation. Examples of regions with duplicated genes with relevant roles in agricultural traits are found in many crops. In ...
Nutrient supply affects the mRNA expression profile of the porcine skeletal muscle
(BMC, 2017-08-10)
Background: The genetic basis of muscle fat deposition in pigs is not well known. So far, we have only identified a limited number of genes involved in the absorption, transport, storage and catabolism ...
A pilot RNA-seq study in 40 pietrain ejaculates to characterize the porcine sperm microbiome
(Elsevier, 2020-08-15)
The microbiome plays a key role in homeostasis and health and it has been also linked to fertility and semen quality in several animal species including swine. Despite the more than likely importance ...
A deletion affecting an LRR-RLK gene co-segregates with the fruit flat shape trait in peach
(Nature Research, 2017-07-27)
In peach, the fat phenotype is caused by a partially dominant allele in heterozygosis (Ss), fruits from
homozygous trees (SS) abort a few weeks after fruit setting. Previous research has identifed a ...
kernInt: A Kernel Framework for Integrating Supervised and Unsupervised Analyses in Spatio-Temporal Metagenomic Datasets
(Frontiers Media, 2021-01-28)
The advent of next-generation sequencing technologies allowed relative quantification of microbiome communities and their spatial and temporal variation. In recent years, supervised learning (i.e., ...
Fruit Morphology and Ripening-Related QTLs in a Newly Developed Introgression Line Collection of the Elite Varieties ‘Védrantais’ and ‘Piel de Sapo’
(MDPI, 2022-11-15)
Melon is an economically important crop with widely diverse fruit morphology and ripening characteristics. Its diploid sequenced genome and multiple genomic tools make this species suitable to study the ...
A mutation in the melon Vacuolar Protein Sorting 41prevents systemic infection of Cucumber mosaic virus
(Nature Research, 2017-09-05)
In the melon exotic accession PI 161375, the gene cmv1, confers recessive resistance to Cucumber
mosaic virus (CMV) strains of subgroup II. cmv1 prevents the systemic infection by restricting the ...
Almond population genomics and non-additive GWAS reveal new insights into almond dissemination history and candidate genes for nut traits and blooming time
(Oxford University Press, 2023-09-25)
Domestication drastically changed crop genomes, fixing alleles of interest and creating different genetic populations. Genome-wide
association studies (GWASs) are a powerful tool to detect these alleles ...