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Almond population genomics and non-additive GWAS reveal new insights into almond dissemination history and candidate genes for nut traits and blooming time
(Oxford University Press, 2023-09-25)
Domestication drastically changed crop genomes, fixing alleles of interest and creating different genetic populations. Genome-wide
association studies (GWASs) are a powerful tool to detect these alleles ...
Selection of Pru p 3 hypoallergenic peach and nectarine varieties
(Wiley, 2019-11-11)
Peach is an important fruit consumed worldwide. However, it is also one of the most frequently reported allergenic fruits. Component diagnosis of peach allergy indicates Pru p 1, Pru p 2, Pru p 3, Pru ...
Exploring deep learning for complex trait genomic prediction in polyploid outcrossing species
(Frontiers Media, 2020-02-06)
Genomic prediction (GP) is the procedure whereby the genetic merits of untested candidates are predicted using genome wide marker information. Although numerous examples of GP exist in plants and animals, ...
cmv1 is a gate for Cucumber mosaic virus transport from bundle sheath cells to phloem in melon
(Wiley Open Access, 2015-12-09)
Cucumber mosaic virus (CMV) has the broadest host range among plant viruses, causing enormous losses in agriculture. In melon, strains of subgroup II are unable to establish a systemic infection in the ...
The apple REFPOP—a reference population for genomics-assisted breeding in apple
(Springer Nature, 2020-11-01)
Breeding of apple is a long-term and costly process due to the time and space requirements for screening selection candidates. Genomics-assisted breeding utilizes genomic and phenotypic information ...
Expression QTL (eQTLs) Analyses Reveal Candidate Genes Associated With Fruit Flesh Softening Rate in Peach [Prunus persica (L.) Batsch]
(Frontiers Media, 2019-12-03)
Significant differences in softening rate have been reported between melting flesh in peach and nectarine varieties. This trait seems to be controlled by several genes. We aimed to identify candidate ...
Comparative QTL analysis in peach ‘Earlygold’ F2 and backcross progenies
(Elsevier, 2021-11-17)
Based on detailed maps, DNA sequences and phenotypic data, there is a great deal of information on the genetics and genomics of ‘Earlygold’, a historical peach cultivar from the US. The F2 between ‘Texas’ ...
Light signals generated by vegetation shade facilitate acclimation to low light in shade-avoider plants
(American Society of Plant Biologists, 2021-05-07)
When growing in search for light, plants can experience continuous or occasional shading by other plants. Plant proximity causes a decrease in the ratio of R to far-red light (low R:FR) due to the ...
Biochemical and genetic implications of the slow ripening phenotype in peach fruit
(Elsevier, 2019-09-14)
The peach [Prunus persica L. (Batsch)] slow ripening (SR) trait is a mutation preventing the normal fruit ripening process. It is determined by a single Mendelian gene (Sr/sr) located on linkage group ...
Genome encode analyses reveal the basis of convergent evolution of fleshy fruit ripening
(Nature Research, 2018-09-24)
Fleshy fruits using ethylene to regulate ripening have developed multiple times in the history of angiosperms, presenting a clear case of convergent evolution whose molecular basis remains largely ...