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Ecological and evolutionary drivers of phenotypic and genetic variation in the European crabapple [Malus sylvestris (L.) Mill.], a wild relative of the cultivated apple
(Oxford University Press, 2023-05-06)
Background and Aims
Studying the relationship between phenotypic and genetic variation in populations distributed across environmental gradients can help us to understand the ecological and evolutionary ...
GreenTray® TIS bioreactor as an effective in vitro culture system for the micropropagation of Prunus spp. rootstocks and analysis of the plant-PGPMs interactions
(Elsevier, 2021-09-23)
The use of the GreenTray® TIS bioreactor for the in vitro analysis of the interaction between plantlets and two Plant Growth-Promoting Microorganisms (PGPMs) (Pseudomonas oryzihabitans PGP01 and ...
Effects of Agronomical Practices on Crop Quality and Sensory Profile
(MDPI, 2024-05-21)
Intercropping of aromatic plants in truffle orchards: short-term effect on extraradical truffle mycelium and aromatic plant growth
(Springer, 2023-06-09)
Background and Aims
Intercropping of truffle-producing trees with aromatic plants is used to improve profitability of truffle orchards during the initial 4–7 years. However, after that period the ...
PERSEUS: an interactive and intuitive web-based tool for pedigree visualization
(Oxford University Press, 2024-02-03)
Pedigree-based analyses’ prime role is to unravel relationships between individuals in breeding programs and germplasms. This is critical information for decoding the genetics underlying main inherited ...
An efficient CRISPR-Cas9 enrichment sequencing strategy for characterizing complex and highly duplicated genomic regions. A case study in the Prunus salicina LG3-MYB10 genes cluster
(BMC, 2022-08-27)
Background: Genome complexity is largely linked to diversifcation and crop innovation. Examples of regions with duplicated genes with relevant roles in agricultural traits are found in many crops. In ...
Genomic analysis of fruit size and shape traits in apple: unveiling candidate genes through GWAS analysis
(Oxford University Press, 2023-12-19)
Genomic tools facilitate the efficient selection of improved genetic materials within a breeding program. Here, we focus on two apple fruit quality traits: shape and size. We utilized data from 11 fruit ...
An LTR retrotransposon in the promoter of a PsMYB10.2 gene associated with the regulation of fruit f lesh color in Japanese plum
(Oxford University Press, 2022-09-13)
Japanese plums exhibit wide diversity of fruit coloration. The red to black hues are caused by the accumulation of anthocyanins, while their absence results in yellow, orange or green fruits. In Prunus, ...
A phased genome of the highly heterozygous ‘Texas’ almond uncovers patterns of allele-specific expression linked to heterozygous structural variants
(Oxford University Press, 2024-04-09)
The vast majority of traditional almond varieties are self-incompatible, and the level of variability of the species is very high, resulting in a high-heterozygosity genome. Therefore, information on ...
GenoDrawing: An Autoencoder Framework for Image Prediction from SNP Markers
(American Association for the Advancement of Science; Nanjing Agricultural University, 2023-11-03)
Advancements in genome sequencing have facilitated whole genome characterization of numerous plant species, providing an abundance of genotypic data for genomic analysis. Genomic selection and neural ...