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Diat.barcode, an open-access curated barcode library for diatoms
(Nature Research, 2019-10-22)
Diatoms (Bacillariophyta) are ubiquitous microalgae which produce a siliceous exoskeleton and which make a major contribution to the productivity of oceans and freshwaters. They display a huge diversity, ...
A rapid cleaning method for diatoms
(Taylor & Francis, 2019-07-18)
We describe here a protocol for cleaning diatoms when time is short and the amount of
sample is very limited. Essentially, the method consists of drying material onto coverslips and
cleaning it directly ...
A polyphasic approach to the study of the genus Nitzschia (Bacillariophyta): three new planktonic species from the Adriatic Sea
(Wiley, 2020-10-21)
The paraphyletic diatom genus Nitzschia comprises over 1000 morphologically distinct pennate taxa, known from the benthos and plankton of freshwater, brackish and marine environments. The principal ...
Eileen J. Cox: her journey with diatoms
(National Botanic Garden of Belgium and Royal Botanical Society of Belgium, 2019-07-09)
Eileen already had a keen interest in science during her school years. She studied Botany at Bristol University from 1967–1970, and it was her University teacher, Professor Frank Round, who inspired her ...
Taxonomy and diversity of a little-known diatom genus Simonsenia (Bacillariaceae) in the marine littoral: novel taxa from the Yellow Sea and the Gulf of Mexico
(National Botanic Garden of Belgium and Royal Botanical Society of Belgium, 2019-07-09)
Background and aims – The diatom genus Simonsenia has been considered for some time a minor taxon, limited in its distribution to fresh and slightly brackish waters. Recently, knowledge of its diversity ...
Evaluation of two short overlapping rbcL markers for diatom metabarcoding of environmental samples: Effects on biomonitoring assessment and species resolution
(Elsevier, 2022-08-08)
Two short diatom rbcL barcodes, 331-bp and 263-bp in length, have frequently been used in diatom metabarcoding studies. They overlap in a common 263-bp region but differ in the presence or absence of a ...
Evaluation and sensitivity analysis of diatom DNA metabarcoding for WFD bioassessment of Mediterranean rivers
(Elsevier, 2020-04-04)
Our study of 164 diatom samples from Catalonia (NE Spain) is the first to evaluate the applicability of DNA metabarcoding, based on high throughput sequencing (HTS) using a 312-bp rbcL marker, for ...
Tribute to Eileen J. Cox - Editorial
(National Botanic Garden of Belgium and Royal Botanical Society of Belgium, 2019-07-09)
This issue is dedicated to Dr. Eileen Joan Cox on the occasion of her 70th birthday. Eileen is a very well-known phycologist who has made a major contribution to diatom research, for instance in terms ...
Assessment of a novel microalgae-cork based technology for removing antibiotics, pesticides and nitrates from groundwater
(Elsevier, 2022-04-29)
Groundwater pollution has increased in recent years due to the intensification of agricultural and livestock activities. This results in a significant reduction in available freshwater resources. Here, ...
The potential of High-Throughput Sequencing (HTS) of natural samples as a source of primary taxonomic information for reference libraries of diatom barcodes
(Czech Phycological Society, 2018-02-27)
Diatoms are used routinely to assess pollution level in rivers and lakes. Current methods are based on identification by light microscopy, which is laborious. An alternative is to identify species based ...