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Use of targeted SNP selection for an improved anchoring of the melon (Cucumis melo L.) scaffold genome assembly
(BMC, 2015-01-22)
Background: The genome of the melon (Cucumis melo L.) double-haploid line DHL92 was recently sequenced, with 87.5 and 80.8% of the scaffold assembly anchored and oriented to the 12 linkage groups, ...
Fruit Morphology and Ripening-Related QTLs in a Newly Developed Introgression Line Collection of the Elite Varieties ‘Védrantais’ and ‘Piel de Sapo’
(MDPI, 2022-11-15)
Melon is an economically important crop with widely diverse fruit morphology and ripening characteristics. Its diploid sequenced genome and multiple genomic tools make this species suitable to study the ...
A mutation in the melon Vacuolar Protein Sorting 41prevents systemic infection of Cucumber mosaic virus
(Nature Research, 2017-09-05)
In the melon exotic accession PI 161375, the gene cmv1, confers recessive resistance to Cucumber
mosaic virus (CMV) strains of subgroup II. cmv1 prevents the systemic infection by restricting the ...
Almond population genomics and non-additive GWAS reveal new insights into almond dissemination history and candidate genes for nut traits and blooming time
(Oxford University Press, 2023-09-25)
Domestication drastically changed crop genomes, fixing alleles of interest and creating different genetic populations. Genome-wide
association studies (GWASs) are a powerful tool to detect these alleles ...
Selection of Pru p 3 hypoallergenic peach and nectarine varieties
(Wiley, 2019-11-11)
Peach is an important fruit consumed worldwide. However, it is also one of the most frequently reported allergenic fruits. Component diagnosis of peach allergy indicates Pru p 1, Pru p 2, Pru p 3, Pru ...
Exploring deep learning for complex trait genomic prediction in polyploid outcrossing species
(Frontiers Media, 2020-02-06)
Genomic prediction (GP) is the procedure whereby the genetic merits of untested candidates are predicted using genome wide marker information. Although numerous examples of GP exist in plants and animals, ...
cmv1 is a gate for Cucumber mosaic virus transport from bundle sheath cells to phloem in melon
(Wiley Open Access, 2015-12-09)
Cucumber mosaic virus (CMV) has the broadest host range among plant viruses, causing enormous losses in agriculture. In melon, strains of subgroup II are unable to establish a systemic infection in the ...
The apple REFPOP—a reference population for genomics-assisted breeding in apple
(Springer Nature, 2020-11-01)
Breeding of apple is a long-term and costly process due to the time and space requirements for screening selection candidates. Genomics-assisted breeding utilizes genomic and phenotypic information ...
Expression QTL (eQTLs) Analyses Reveal Candidate Genes Associated With Fruit Flesh Softening Rate in Peach [Prunus persica (L.) Batsch]
(Frontiers Media, 2019-12-03)
Significant differences in softening rate have been reported between melting flesh in peach and nectarine varieties. This trait seems to be controlled by several genes. We aimed to identify candidate ...
Comparative QTL analysis in peach ‘Earlygold’ F2 and backcross progenies
(Elsevier, 2021-11-17)
Based on detailed maps, DNA sequences and phenotypic data, there is a great deal of information on the genetics and genomics of ‘Earlygold’, a historical peach cultivar from the US. The F2 between ‘Texas’ ...