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Whole genome scanning of a Mediterranean basin hotspot collection provide new insights into olive tree biodiversity and biology
(Wiley, 2023-05-10)
Olive tree (Olea europaea L. subsp. europaea var. europaea) is one of the most important species of the Mediterranean region and one of the most ancient species domesticated. The availability of whole ...
Mapping Cucumber Vein Yellowing Virus Resistance in Cucumber (Cucumis sativus L.) by Using BSA-seq Analysis
(Frontiers Media, 2019-12-03)
Cucumber vein yellowing virus (CVYV) causes severe yield losses in cucurbit crops across Mediterranean countries. The control of this virus is based on cultural practices to prevent the presence of its ...
Shape, firmness and fruit quality QTLs shared in two non-related strawberry populations
(Elsevier, 2021-07-29)
The cultivated strawberry (Fragaria x ananassa) is an octoploid species (2n = 8x = 56), appreciated widely for its fruit. There have been very few studies on fruit quality traits, which are known to be ...
Exploring large-scale gene coexpression networks in peach (Prunus persica L.): a new tool for predicting gene function
(Oxford University Press, 2024-01-02)
Peach is a model for Prunus genetics and genomics, however, identifying and validating genes associated to peach breeding traits is a
complex task. A gene coexpression network (GCN) capable of capturing ...
QTL mapping of melon fruit quality traits using a high-density GBS-based genetic map
(BMC, 2018-12-04)
Background
Melon shows a broad diversity in fruit morphology and quality, which is still underexploited in breeding programs. The knowledge of the genetic basis of fruit quality traits is important for ...
High-density multi-population consensus genetic linkage map for peach
(Public Library of Science, 2018-11-21)
Highly saturated genetic linkage maps are extremely helpful to breeders and are an essential prerequisite for many biological applications such as the identification of marker-trait associations, mapping ...
An improved assembly and annotation of the melon (Cucumis melo L.) reference genome
(Nature Research, 2018-05-24)
We report an improved assembly (v3.6.1) of the melon (Cucumis melo L.) genome and a new genome annotation (v4.0). The optical mapping approach allowed correcting the order and the orientation of 21 ...
Genotyping by Sequencing in Almond: SNP Discovery, Linkage Mapping, and Marker Design
(Genetics Society of America, 2017-11-15)
In crop plant genetics, linkage maps provide the basis for the mapping of loci that affect important traits and for the selection of markers to be applied in crop improvement. In outcrossing species ...
Identification of a new allele of the Dw gene causing brachytic dwarfing in peach
(BioMed Central, 2018-06-14)
Objective
Peach brachytic dwarfism determined by Dwarf gene (Dw) is an undesired trait segregating in some peach breeding programs. Recently, a single nucleotide polymorphism (SNP) mutation in the ...
PERSEUS: an interactive and intuitive web-based tool for pedigree visualization
(Oxford University Press, 2024-02-03)
Pedigree-based analyses’ prime role is to unravel relationships between individuals in breeding programs and germplasms. This is critical information for decoding the genetics underlying main inherited ...