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An efficient CRISPR-Cas9 enrichment sequencing strategy for characterizing complex and highly duplicated genomic regions. A case study in the Prunus salicina LG3-MYB10 genes cluster
(Plant Methods, 2022-08-27)Background: Genome complexity is largely linked to diversifcation and crop innovation. Examples of regions with duplicated genes with relevant roles in agricultural traits are found in many crops. In ... -
An Endeavor to Find Starter Feed Alternatives and Techniques for Zebrafish First-Feeding Larvae: The Effects on Viability, Morphometric Traits, Digestive Enzymes, and Expression of Growth-Related Genes
(Zebrafish, 2021-02-12)Low and variable growth and survival rates (SR) of 6–10 days postfertilization zebrafish larvae are a problem. This problem seems to be linked to starter feed characteristics. This study is an attempt ... -
An improved assembly and annotation of the melon (Cucumis melo L.) reference genome
(Scientific Reports, 2018-05-24)We report an improved assembly (v3.6.1) of the melon (Cucumis melo L.) genome and a new genome annotation (v4.0). The optical mapping approach allowed correcting the order and the orientation of 21 ... -
An improved melon reference genome with single-molecule sequencing uncovers a recent burst of transposable elements with potential impact on genes
(Frontiers in Plant Science, 2020-01-31)The published melon (Cucumis melo L.) reference genome assembly (v3.6.1) has still 41.6 Mb (Megabases) of sequences unassigned to pseudo-chromosomes and about 57 Mb of gaps. Although different approaches ... -
An innovative water-assisted UV-C disinfection system to improve the safety of strawberries frozen under cryogenic conditions
(Innovative Food Science and Emerging Technologies, 2021-08-12)Strawberries inoculated with Salmonella enterica, Listeria monocytogenes (108 CFU/mL, 50 μL) and murine norovirus (MNV-1; 106 TCID50/mL, 50 μL), were washed for 2 min in a water-assisted UV-C light tank ... -
An insect’s energy bar: the potential role of plant guttation on biological control
(Current Opinion in Insect Science, 2023-11-07)Plant guttation is an exudation fluid composed of xylem and phloem sap secreted at the margins of leaves of many agricultural crops. Although plant guttation is a widespread phenomenon, its effect on ... -
An integrated approach for increasing breeding efficiency in apple and peach in Europe
(Horticulture Research, 2018-03-01)Despite the availability of whole genome sequences of apple and peach, there has been a considerable gap between genomics and breeding. To bridge the gap, the European Union funded the FruitBreedomics ... -
An LTR retrotransposon in the promoter of a PsMYB10.2 gene associated with the regulation of fruit f lesh color in Japanese plum
(Horticulture Research, 2022-09-13)Japanese plums exhibit wide diversity of fruit coloration. The red to black hues are caused by the accumulation of anthocyanins, while their absence results in yellow, orange or green fruits. In Prunus, ... -
An Overview of Rice Cultivation in Spain and the Management of Herbicide-Resistant Weeds
(Agronomy, 2021-05-28)Spain is the second highest rice-producing country in the European Union, with approximately 105,000 ha used to grow this crop. The major rice-producing regions in Spain are Andalusia, Extremadura, ... -
An Update on Ciguatoxins and CTX-like Toxicity in Fish from Different Trophic Levels of the Selvagens Islands (NE Atlantic, Madeira, Portugal)
(Toxins, 2021-08-20)The Selvagens Islands, which are a marine protected area located at the southernmost point of the Portuguese maritime zone, have been associated with fish harboring ciguatoxins (CTX) and linked to ... -
An Updated Review of Tetrodotoxin and Its Peculiarities
(Marine Drugs, 2022-01-03)Tetrodotoxin (TTX) is a crystalline, weakly basic, colorless organic substance and is one of the most potent marine toxins known. Although TTX was first isolated from pufferfish, it has been found in ... -
Anaerobic digestion and electromethanogenic microbial electrolysis cell integrated system: Increased stability and recovery of ammonia and methane
(Renewable Energy, 2017-12-18)The integration of anaerobic digestion (AD) and a microbial electrolysis cell (MEC) with an electromethanogenic biocathode is proposed to increase the stability and robustness of the AD process against ... -
Analgesia during Parturition in Domestic Animals: Perspectives and Controversies on Its Use
(Animals, 2022-10-06)This article analyzes the physiological role of pain during parturition in domestic animals, discusses the controversies surrounding the use of opioids, non-steroidal anti-inflammatory drugs (NSAIDs), ... -
Analysing olive ripening with digital image RGB histograms
(Analytica Chimica Acta, 2023-10-09)Digital images are commonly used to monitor processes that are based on colour changes due to their simplicity and easy capture. Colour information in these images can be analysed objectively and ... -
Analysing the Expression of Eight Clock Genes in Five Tissues From Fasting and Fed Sows
(Frontiers in Genetics, 2018-10-18)In a previous study, we observed that circadian clock genes are differentially expressed in the skeletal muscle of fasting and fed sows. The goal of the current work was to investigate if these genes ... -
Analysis of farmers’ stated risk using lotteries and their perceptions of climate change in the Northwest of Mexico
(Agronomy, 2018-12-21)Risk attitudes are relevant factors affecting production, management and investment decisions at the farm level. They are key factors related to farmers’ attitudes towards the environment and climate ... -
Analysis of pesticide residues in honeybee (Apis mellifera L.) and in corbicular pollen. Exposure in citrus orchard with an integrated pest management system
(Talanta, 2019-05-28)In the last years, the honeybee population is facing growing threats such as expansion of pathogens, incorrect use of phytosanitary products and environmental contaminants, loss or fragmentation of ... -
Analysis of porcine adipose tissue transcriptome reveals differences in de novo fatty acid synthesis in pigs with divergent muscle fatty acid composition
(BMC Genomics, 2013-12-01)Background: In pigs, adipose tissue is one of the principal organs involved in the regulation of lipid metabolism. It is particularly involved in the overall fatty acid synthesis with consequences in ... -
Analysis of porcine IGF2 gene expression in adipose tissue and its effect on fatty acid composition
(Plos One, 2019-08-08)IGF2:g.3072G>A polymorphism has been described as the causal mutation of a maternally imprinted QTL for muscle growth and fat deposition in pigs. The objective of the current work was to study the ... -
Analysis of the causal structure of traits involved in sow lactation feed efficiency
(Genetics Selection Evolution, 2022-07-26)Background Feed efficiency during lactation involves a set of phenotypic traits that form a complex system, with some traits exerting causal effects on the others. Information regarding such ...